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popDrowser - Drosophila Genome Variation Browser (DGRP Freeze1 dataset): 23.01 Mbp from 2L:1..23,011,544

Track description On-the-fly Analysis Help General Help

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Recombination Rate (cM/Mb) [50kb window]

N's [100kb window]

Gene density [100kb window]

Transposon density [100kb window]

Pi [100kb window]

Divergence (dmel-dsim)[100kb window]

r2 (Zns)[100kb window]

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Genomics, Bioinformatics and Evolution Group. Institut de Biologia i Biomedicina - IBB / Dept. of Genetics and Microbiology, Universitat Autonoma de Barcelona (UAB) [Contact us]
Molecular Evolutionary Genetics Group, Universitat de Barcelona (UB) [Contact us]

CITE US:
Ràmia M, Librado P, Casillas S, Rozas J, Barbadilla A.
PopDrowser: the Population Drosophila Browser.
Bioinformatics. 2012 Feb 15;28(4):595-6. Epub 2011 Dec 15.[Link]

6-frame translation [?]	Insertion sites [?]	Transposons [?]
CDS [?]	mRNA [?]	tRNAs [?]
Chromosome Bands [?]	Noncoding RNAs [?]	UCSC-phastConsElements15way [?]
DNA_GC [?]	Orthologous [?]
Genes [?]	Pseudogenes [?]

N's [100bp window] [?]	N's [1kb window] [?]	N's [50kb window] [?]
N's [100kb window] [?]	N's [500bp window] [?]
N's [10kb window] [?]	N's [50bp window] [?]

Divergence (dmel-dsim)[100bp window] [?]	Divergence (dmel-dsim)[1kb window] [?]	Divergence (dmel-dsim)[50kb window] [?]
Divergence (dmel-dsim)[100kb window] [?]	Divergence (dmel-dsim)[500bp window] [?]
Divergence (dmel-dsim)[10kb window] [?]	Divergence (dmel-dsim)[50bp window] [?]

Divergence (dmel-dyak)[100bp window] [?]	Divergence (dmel-dyak)[1kb window] [?]	Divergence (dmel-dyak)[50kb window] [?]
Divergence (dmel-dyak)[100kb window] [?]	Divergence (dmel-dyak)[500bp window] [?]
Divergence (dmel-dyak)[10kb window] [?]	Divergence (dmel-dyak)[50bp window] [?]

Eta [100bp window] [?]	Eta [1kb window] [?]	Eta [50kb window] [?]
Eta [100kb window] [?]	Eta [500bp window] [?]
Eta [10kb window] [?]	Eta [50bp window] [?]

popDrowser - Drosophila Genome Variation Browser (DGRP Freeze1 dataset): 23.01 Mbp from 2L:1..23,011,544

Snapshots

Snapshot Name

Snapshot Timestamp [GMT]

Community Tracks

Custom Tracks

EtaE [100bp window] [?]	EtaE [1kb window] [?]	EtaE [50kb window] [?]
EtaE [100kb window] [?]	EtaE [500bp window] [?]
EtaE [10kb window] [?]	EtaE [50bp window] [?]

Pi [100bp window] [?]	Pi [1kb window] [?]	Pi [50kb window] [?]
Pi [100kb window] [?]	Pi [500bp window] [?]
Pi [10kb window] [?]	Pi [50bp window] [?]

S [100bp window] [?]	S [1kb window] [?]	S [50kb window] [?]
S [100kb window] [?]	S [500bp window] [?]
S [10kb window] [?]	S [50bp window] [?]

Theta [100bp window] [?]	Theta [1kb window] [?]	Theta [50kb window] [?]
Theta [100kb window] [?]	Theta [500bp window] [?]
Theta [10kb window] [?]	Theta [50bp window] [?]

r2 (Zns)[100bp window]	r2 (Zns)[1kb window] [?]	r2 (Zns)[50kb window] [?]
r2 (Zns)[100kb window] [?]	r2 (Zns)[500bp window]
r2 (Zns)[10kb window] [?]	r2 (Zns)[50bp window]

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